Colab notebooks
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This section contains various pointers that may be helpful when working with .
Google Colaboratory, or “Colab” for short, is a product from Google Research. Colab allows anybody to write and execute arbitrary python code through the browser, and is especially well suited to machine learning, data analysis and education. More technically, Colab is a hosted Jupyter notebook service that requires no setup to use, while providing free access to computing resources including GPUs.
IDC Colab example notebooks are maintained in this repository:
Notebook demonstrating deployment and application of abdominal structures segmentation tool to IDC data, developed for the course:
, contributed by , Mayo Clinic
, contributed by , Mayo Clinic
Notebooks contributed by , ISB-CGC, demonstrating the utility of BigQuery in correlative analysis of radiomics and genomics data:
Colab limitations:
Transferring data between Colab and Google Drive:
Potentially interesting sources of example notebooks:
Google Colab Tips for Power Users:
Mounting GCS bucket using gcsfuse
:
Almost-free Jupyter Notebooks on Google Cloud: