IDC User Guide
  • Welcome!
  • 🚀Getting started
  • Core functions
  • Frequently asked questions
  • Support
  • Key pointers
  • Publications
  • IDC team
  • Acknowledgments
  • Jobs
  • Tutorials
    • Python notebook tutorials
    • Slide microscopy
      • Using QuPath for visualization
  • Data
    • Introduction
    • Data model
    • Data versioning
    • Organization of data
      • Files and metadata
      • Resolving CRDC Globally Unique Identifiers (GUIDs)
      • Clinical data
      • Organization of data, v2 through V13 (deprecated)
        • Files and metadata
        • Resolving CRDC Globally Unique Identifiers (GUIDs)
        • Clinical data
      • Organization of data in v1 (deprecated)
    • Downloading data
      • Downloading data with s5cmd
    • Data release notes
    • Data known issues
  • DICOM
    • Introduction to DICOM
    • DICOM data model
    • Original objects
    • Derived objects
      • DICOM Segmentations
      • DICOM Radiotherapy Structure Sets
      • DICOM Structured Reports
    • Coding schemes
    • DICOM-TIFF dual personality files
    • IDC DICOM white papers
  • Portal
    • Getting started
    • Exploring data and cohorts
      • Exploring imaging data
      • Viewing collections, studies, and series
      • Understanding cohorts
    • Cohort manifests
    • Visualizing images
    • Proxy policy
    • Viewer release notes
    • Portal release notes
    • Portal known issues
  • API
    • Getting Started
    • IDC API Concepts
    • Manifests
    • Accessing the API
    • Endpoint Details
    • V1 API
      • Getting Started
      • IDC Data Model Concepts
      • Accessing the API
      • Endpoint Details
      • Release Notes
  • Cookbook
    • Colab notebooks
    • BigQuery
    • Looker dashboards
      • Dashboard for your cohort
      • More dashboard examples
    • ACCESS allocations
    • Compute engine
      • 3D Slicer desktop VM
      • Using a BQ Manifest to Load DICOM Files onto a VM
      • Using VS Code with GCP VMs
      • Security considerations
    • NCI Cloud Resources
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